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https://github.com/simonw/sqlite-utils.git
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--encoding option for non-utf8 CSV/TSV, closes #182
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3 changed files with 137 additions and 36 deletions
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@ -354,6 +354,10 @@ For tab-delimited data, use ``--tsv``::
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$ sqlite-utils insert dogs.db dogs docs.tsv --tsv
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Data is expected to be encoded as Unicode UTF-8. If your data is an another character encoding you can specify it using the ``--encoding`` option::
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$ sqlite-utils insert dogs.db dogs docs.tsv --tsv --encoding=latin-1
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.. _cli_insert_replace:
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Insert-replacing data
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@ -1,5 +1,6 @@
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import base64
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import click
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import codecs
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from click_default_group import DefaultGroup
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from datetime import datetime
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import hashlib
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@ -15,6 +16,18 @@ from .utils import sqlite3, decode_base64_values
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VALID_COLUMN_TYPES = ("INTEGER", "TEXT", "FLOAT", "BLOB")
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UNICODE_ERROR = """
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{}
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The input you provided uses a character encoding other than utf-8.
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You can fix this by passing the --encoding= option with the encoding of the file.
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If you do not know the encoding, running 'file filename.csv' may tell you.
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It's often worth trying: --encoding=latin-1
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""".strip()
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def output_options(fn):
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for decorator in reversed(
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@ -493,7 +506,7 @@ def insert_upsert_options(fn):
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required=True,
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),
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click.argument("table"),
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click.argument("json_file", type=click.File(), required=True),
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click.argument("json_file", type=click.File("rb"), required=True),
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click.option(
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"--pk", help="Columns to use as the primary key, e.g. id", multiple=True
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),
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@ -519,6 +532,10 @@ def insert_upsert_options(fn):
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type=(str, str),
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help="Default value that should be set for a column",
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),
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click.option(
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"--encoding",
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help="Character encoding for input, defaults to utf-8",
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),
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)
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):
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fn = decorator(fn)
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@ -541,10 +558,15 @@ def insert_upsert_implementation(
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truncate=False,
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not_null=None,
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default=None,
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encoding=None,
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):
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db = sqlite_utils.Database(path)
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if (nl + csv + tsv) >= 2:
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raise click.ClickException("Use just one of --nl, --csv or --tsv")
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if encoding and not (csv or tsv):
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raise click.ClickException("--encoding must be used with --csv or --tsv")
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encoding = encoding or "utf-8"
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json_file = codecs.getreader(encoding)(json_file)
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if pk and len(pk) == 1:
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pk = pk[0]
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if csv or tsv:
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@ -599,6 +621,7 @@ def insert(
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tsv,
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batch_size,
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alter,
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encoding,
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ignore,
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replace,
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truncate,
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@ -611,49 +634,68 @@ def insert(
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Input should be a JSON array of objects, unless --nl or --csv is used.
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"""
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insert_upsert_implementation(
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path,
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table,
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json_file,
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pk,
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nl,
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csv,
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tsv,
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batch_size,
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alter=alter,
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upsert=False,
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ignore=ignore,
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replace=replace,
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truncate=truncate,
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not_null=not_null,
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default=default,
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)
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try:
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insert_upsert_implementation(
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path,
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table,
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json_file,
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pk,
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nl,
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csv,
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tsv,
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batch_size,
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alter=alter,
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upsert=False,
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ignore=ignore,
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replace=replace,
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truncate=truncate,
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encoding=encoding,
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not_null=not_null,
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default=default,
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)
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except UnicodeDecodeError as ex:
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raise click.ClickException(UNICODE_ERROR.format(ex))
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@cli.command()
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@insert_upsert_options
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def upsert(
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path, table, json_file, pk, nl, csv, tsv, batch_size, alter, not_null, default
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path,
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table,
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json_file,
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pk,
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nl,
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csv,
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tsv,
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batch_size,
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alter,
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not_null,
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default,
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encoding,
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):
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"""
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Upsert records based on their primary key. Works like 'insert' but if
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an incoming record has a primary key that matches an existing record
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the existing record will be updated.
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"""
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insert_upsert_implementation(
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path,
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table,
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json_file,
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pk,
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nl,
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csv,
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tsv,
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batch_size,
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alter=alter,
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upsert=True,
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not_null=not_null,
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default=default,
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)
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try:
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insert_upsert_implementation(
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path,
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table,
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json_file,
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pk,
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nl,
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csv,
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tsv,
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batch_size,
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alter=alter,
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upsert=True,
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not_null=not_null,
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default=default,
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encoding=encoding,
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)
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except UnicodeDecodeError as ex:
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raise click.ClickException(UNICODE_ERROR.format(ex))
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@cli.command(name="create-table")
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@ -685,7 +685,9 @@ def test_insert_csv_tsv(content, option, db_path, tmpdir):
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db = Database(db_path)
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file_path = str(tmpdir / "insert.csv-tsv")
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open(file_path, "w").write(content)
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result = CliRunner().invoke(cli.cli, ["insert", db_path, "data", file_path, option])
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result = CliRunner().invoke(
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cli.cli, ["insert", db_path, "data", file_path, option], catch_exceptions=False
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)
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assert 0 == result.exit_code
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assert [{"foo": "1", "bar": "2", "baz": "3"}] == list(db["data"].rows)
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@ -1024,7 +1026,9 @@ def test_upsert(db_path, tmpdir):
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]
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open(json_path, "w").write(json.dumps(insert_dogs))
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result = CliRunner().invoke(
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cli.cli, ["insert", db_path, "dogs", json_path, "--pk", "id"]
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cli.cli,
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["insert", db_path, "dogs", json_path, "--pk", "id"],
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catch_exceptions=False,
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)
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assert 0 == result.exit_code, result.output
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assert 2 == db["dogs"].count
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@ -1035,7 +1039,9 @@ def test_upsert(db_path, tmpdir):
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]
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open(json_path, "w").write(json.dumps(insert_dogs))
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result = CliRunner().invoke(
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cli.cli, ["upsert", db_path, "dogs", json_path, "--pk", "id"]
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cli.cli,
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["upsert", db_path, "dogs", json_path, "--pk", "id"],
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catch_exceptions=False,
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)
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assert 0 == result.exit_code, result.output
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assert [
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@ -1601,3 +1607,52 @@ def test_extract(db_path, args, expected_table_schema, expected_other_schema):
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0
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].schema
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assert other_schema == expected_other_schema
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def test_insert_encoding(tmpdir):
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db_path = str(tmpdir / "test.db")
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latin1_csv = (
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b"date,name,latitude,longitude\n"
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b"2020-01-01,Barra da Lagoa,-27.574,-48.422\n"
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b"2020-03-04,S\xe3o Paulo,-23.561,-46.645\n"
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b"2020-04-05,Salta,-24.793:-65.408"
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)
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assert latin1_csv.decode("latin-1").split("\n")[2].split(",")[1] == "São Paulo"
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csv_path = str(tmpdir / "test.csv")
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open(csv_path, "wb").write(latin1_csv)
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# First attempt should error:
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bad_result = CliRunner().invoke(
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cli.cli, ["insert", db_path, "places", csv_path, "--csv"]
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)
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assert bad_result.exit_code == 1
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assert (
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"The input you provided uses a character encoding other than utf-8"
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in bad_result.output
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)
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# Using --encoding=latin-1 should work
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good_result = CliRunner().invoke(
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cli.cli,
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["insert", db_path, "places", csv_path, "--encoding", "latin-1", "--csv"],
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)
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assert good_result.exit_code == 0
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db = Database(db_path)
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assert list(db["places"].rows) == [
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{
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"date": "2020-01-01",
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"name": "Barra da Lagoa",
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"latitude": "-27.574",
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"longitude": "-48.422",
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},
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{
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"date": "2020-03-04",
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"name": "São Paulo",
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"latitude": "-23.561",
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"longitude": "-46.645",
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},
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{
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"date": "2020-04-05",
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"name": "Salta",
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"latitude": "-24.793:-65.408",
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"longitude": None,
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},
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]
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