--functions can take filenames, can be used multiple times (#681)

Closes #659

The --functions option now accepts:
- File paths ending in .py (e.g., --functions my_funcs.py)
- Multiple invocations (e.g., --functions foo.py --functions 'def bar(): ...')
- Inline Python code (existing behavior)

Implementation follows the same pattern as llm's --functions flag
(simonw/llm@a880c123).

Changes:
- Added multiple=True to --functions Click option in query, bulk, and memory commands
- Modified _register_functions() to detect and read .py files
- Updated _maybe_register_functions() to iterate over multiple function sources
- Removed unused bytes/bytearray handling
- Added comprehensive tests for file paths and multiple invocations
- Updated documentation with examples

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude <noreply@anthropic.com>

* Shorter help for --functions

---------

Co-authored-by: Claude <noreply@anthropic.com>

sqlite_utils/cli.py

@@ -962,7 +962,7 @@ def insert_upsert_implementation(
     db = sqlite_utils.Database(path)
     _load_extensions(db, load_extension)
     if functions:
-        _register_functions(db, functions)
+        _maybe_register_functions(db, functions)
     if (delimiter or quotechar or sniff or no_headers) and not tsv:
         csv = True
     if (nl + csv + tsv) >= 2:
@@ -1370,7 +1370,9 @@ def upsert(
 @click.argument("file", type=click.File("rb"), required=True)
 @click.option("--batch-size", type=int, default=100, help="Commit every X records")
 @click.option(
-    "--functions", help="Python code defining one or more custom SQL functions"
+    "--functions",
+    help="Python code or file path defining custom SQL functions",
+    multiple=True,
 )
 @import_options
 @load_extension_option
@@ -1759,7 +1761,9 @@ def drop_view(path, view, ignore, load_extension):
     help="Named :parameters for SQL query",
 )
 @click.option(
-    "--functions", help="Python code defining one or more custom SQL functions"
+    "--functions",
+    help="Python code or file path defining custom SQL functions",
+    multiple=True,
 )
 @load_extension_option
 def query(
@@ -1796,7 +1800,7 @@ def query(
     db.register_fts4_bm25()
 
     if functions:
-        _register_functions(db, functions)
+        _maybe_register_functions(db, functions)
 
     _execute_query(
         db,
@@ -1824,7 +1828,9 @@ def query(
 )
 @click.argument("sql")
 @click.option(
-    "--functions", help="Python code defining one or more custom SQL functions"
+    "--functions",
+    help="Python code or file path defining custom SQL functions",
+    multiple=True,
 )
 @click.option(
     "--attach",
@@ -1996,7 +2002,7 @@ def memory(
     db.register_fts4_bm25()
 
     if functions:
-        _register_functions(db, functions)
+        _maybe_register_functions(db, functions)
 
     if return_db:
         return db
@@ -3281,6 +3287,13 @@ def _load_extensions(db, load_extension):
 
 def _register_functions(db, functions):
     # Register any Python functions as SQL functions:
+    # Check if this is a file path
+    if "\n" not in functions and functions.endswith(".py"):
+        try:
+            functions = pathlib.Path(functions).read_text()
+        except FileNotFoundError:
+            raise click.ClickException("File not found: {}".format(functions))
+
     sqlite3.enable_callback_tracebacks(True)
     globals = {}
     try:
@@ -3291,3 +3304,18 @@ def _register_functions(db, functions):
     for name, value in globals.items():
         if callable(value) and not name.startswith("_"):
             db.register_function(value, name=name)
+
+
+def _value_or_none(value):
+    if getattr(value, "__class__", None).__name__ == "Sentinel":
+        return None
+    return value
+
+
+def _maybe_register_functions(db, functions_list):
+    if not functions_list:
+        return
+    for functions in functions_list:
+        functions = _value_or_none(functions)
+        if isinstance(functions, str) and functions.strip():
+            _register_functions(db, functions)