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sqlite-utils analyze-tables command and table.analyze_column() method
Closes #207
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5 changed files with 456 additions and 0 deletions
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@ -7,6 +7,7 @@ import hashlib
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import pathlib
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import sqlite_utils
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from sqlite_utils.db import AlterError
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import textwrap
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import itertools
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import json
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import os
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@ -1354,6 +1355,93 @@ def insert_files(
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)
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@cli.command(name="analyze-tables")
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@click.argument(
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"path",
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type=click.Path(file_okay=True, dir_okay=False, allow_dash=False, exists=True),
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required=True,
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)
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@click.argument("tables", nargs=-1)
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@click.option(
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"-c",
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"--column",
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"columns",
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type=str,
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multiple=True,
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help="Specific columns to analyze",
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)
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@click.option("--save", is_flag=True, help="Save results to _analyze_tables table")
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@load_extension_option
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def analyze_tables(
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path,
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tables,
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columns,
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save,
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load_extension,
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):
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"Analyze the columns in one or more tables"
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db = sqlite_utils.Database(path)
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_load_extensions(db, load_extension)
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if not tables:
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tables = db.table_names()
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todo = []
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table_counts = {}
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for table in tables:
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table_counts[table] = db[table].count
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for column in db[table].columns:
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if not columns or column.name in columns:
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todo.append((table, column.name))
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# Now we now how many we need to do
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for i, (table, column) in enumerate(todo):
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column_details = db[table].analyze_column(
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column, total_rows=table_counts[table], value_truncate=80
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)
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if save:
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db["_analyze_tables_"].insert(
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column_details._asdict(), pk=("table", "column"), replace=True
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)
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most_common_rendered = _render_common(
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"\n\n Most common:", column_details.most_common
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)
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least_common_rendered = _render_common(
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"\n\n Least common:", column_details.least_common
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)
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details = (
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(
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textwrap.dedent(
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"""
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{table}.{column}: ({i}/{total})
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Total rows: {total_rows}
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Null rows: {num_null}
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Blank rows: {num_blank}
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Distinct values: {num_distinct}{most_common_rendered}{least_common_rendered}
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"""
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)
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.strip()
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.format(
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i=i + 1,
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total=len(todo),
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most_common_rendered=most_common_rendered,
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least_common_rendered=least_common_rendered,
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**column_details._asdict()
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)
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)
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+ "\n"
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)
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click.echo(details)
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def _render_common(title, values):
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if values is None:
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return ""
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lines = [title]
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for value, count in values:
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lines.append(" {}: {}".format(count, value))
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return "\n".join(lines)
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FILE_COLUMNS = {
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"name": lambda p: p.name,
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"path": lambda p: str(p),
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